mybib.bib

@techreport{hoff_niu_wellner_2011_tr,
  title = {Information bounds for {G}aussian copulas},
  author = {Hoff, P.D. and Niu, X. and Wellner, J.A.},
  institution = {Department of Statistics, University of Washington},
  year = {2011},
  number = {586},
  apdf = {http://www.stat.washington.edu/research/reports/2011/tr586.pdf},
  eprint = {arXiv:1110.3572}
}
@article{hoff_niu_2009_ss,
  title = {A Covariance Regression Model},
  author = {Hoff, P.D. and Niu, X.},
  journal = {{\rm To appear in} Statistica Sinica},
  year = {2011},
  apdf = {http://www.stat.washington.edu/research/reports/2009/tr565.pdf},
  eprint = {arXiv:1102.5721},
  url = { http://www.stat.washington.edu/hoff/Code/hoff_niu_2009_ss}
}
@article{raftery_niu_hoff_yeung_2010_tr,
  title = {Fast Inference for the Latent Space Network Model Using a Case-Control Approximate Likelihood},
  author = {Raftery, A.E. and Niu, X. and Hoff, P.D. and Yeung, K.Y.},
  journal = {{\rm To appear in} Journal of Computational and Graphical Statistics},
  year = {2011},
  pdf = {http://www.stat.washington.edu/research/reports/2010/tr572.pdf}
}
@article{hoff_2011_csda,
  title = {Hierarchical multilinear models for multiway data},
  author = {Hoff, P.D.},
  journal = {Computational Statistics \& Data Analysis},
  issn = {0167-9473},
  year = {2011},
  volume = {55},
  pages = {530--543},
  publisher = {Elsevier},
  eprint = {arXiv:1005.5425},
  url = { http://www.stat.washington.edu/hoff/Code/hoff_2011_csda}
}
@article{hoff_2011_ba,
  title = {Separable covariance arrays via the {T}ucker product, with applications to multivariate relational data},
  author = {Hoff, P.D.},
  year = {2011},
  journal = {Bayesian Analysis},
  volume = {6},
  pages = {179-196},
  eprint = {arXiv:1008.2169},
  url = { http://www.stat.washington.edu/hoff/Code/hoff_2011_ba}
}
@article{westveld_hoff_2011_aoas,
  author = {A.H. Westveld and P.D. Hoff},
  title = {A Mixed Effects Model for Longitudinal Relational and Network Data, with Applications to International Trade and Conflict},
  year = {2011},
  journal = {Annals of Applied Statistics},
  volume = {5},
  pages = {843--872},
  eprint = {arXiv:1009.1436}
}
@misc{westveld_hoff_2010_arxiv,
  author = {A.H. Westveld and P.D. Hoff},
  title = {A Statistical View of Learning in the Centipede Game},
  year = {2010},
  eprint = {arXiv:1003.2253}
}
@article{bronner2010array,
  title = {Array-based comparative genomic hybridization in ulcerative colitis neoplasia: single non-dysplastic biopsies distinguish progressors from non-progressors},
  author = {Bronner, M.P. and Skacel, M. and Crispin, D.A. and Hoff, P.D. and Emond, M.J. and Lai, L.A. and Tubbs, R.R. and O'Sullivan, J.N. and Rabinovitch, P.S. and Brentnall, T.A.},
  journal = {Modern Pathology},
  issn = {0893-3952},
  publisher = {Nature Publishing Group},
  year = {2010},
  volume = {23},
  pages = {1624-1633}
}
@article{oron_azriel_hoff_2011_ijbs,
  author = {A.P. Oron and D. Azriel and P.D. Hoff},
  title = {Dose-finding designs: the role of convergence properties},
  year = {2011},
  journal = {International Journal of Biostatistics},
  volume = {7},
  number = {1},
  pages = {article 39},
  eprint = {arXiv:0908.2616}
}
@article{hoff_2009_cmot,
  title = {Multiplicative latent factor models for description and prediction of social networks},
  author = {Hoff, P.D.},
  journal = {Computational \& Mathematical Organization Theory},
  volume = {15},
  number = {4},
  pages = {261--272},
  issn = {1381-298X},
  year = {2009},
  publisher = {Springer},
  pdf = {http://www.csss.washington.edu/Papers/wp54.pdf}
}
@book{hoff_2009_springer,
  author = {Hoff, P.D.},
  title = {A first course in {B}ayesian statistical methods},
  series = {Springer Texts in Statistics},
  publisher = {Springer},
  address = {New York},
  year = {2009},
  pages = {x+270},
  isbn = {978-0-387-92299-7},
  mrclass = {62-01 (62F15)},
  mrnumber = {2648134},
  http = {http://www.stat.washington.edu/~hoff/book.php}
}
@article{hoff_2009_jcgs,
  author = {Hoff, P.D.},
  title = {Simulation of the {M}atrix {B}ingham-von {M}ises-{F}isher {D}istribution, {W}ith {A}pplications to {M}ultivariate and {R}elational {D}ata},
  year = {2009},
  journal = {Journal of Computational and Graphical Statistics},
  volume = {18},
  number = {2},
  pages = {438--456},
  cisid = {302068},
  eprint = {arXiv:0712.4166},
  url = { http://www.stat.washington.edu/hoff/Code/hoff_2009_jcgs}
}
@article{hoff_2009_jrssb,
  author = {Hoff, P.D.},
  title = {A Hiearchical Eigenmodel for Pooled Covariance Estimation},
  year = {2009},
  journal = {Journal of the Royal Statistical Society, Series B: Statistical Methodology},
  volume = {71},
  number = {5},
  pages = {971--992},
  cisid = {306321},
  eprint = {arXiv:0804.0031},
  url = { http://www.stat.washington.edu/hoff/Code/hoff_2009_jrssb}
}
@article{oron_hoff_2009_sim,
  author = {Oron, A.P. and Hoff, P.D.},
  title = {The $k$-in-a-row Up-and-down Design, Revisited},
  year = {2009},
  journal = {Statistics in Medicine},
  volume = {28},
  number = {13},
  pages = {1805--1820},
  cisid = {313042}
}
@article{krivitsky_handcock_raftery_hoff_2009_socnet,
  title = {Representing degree distributions, clustering, and homophily in social networks with latent cluster random effects models},
  author = {Krivitsky, P.N. and Handcock, M.S. and Raftery, A.E. and Hoff, P.D.},
  journal = {Social networks},
  volume = {31},
  number = {3},
  pages = {204--213},
  issn = {0378-8733},
  year = {2009},
  publisher = {Elsevier},
  pdf = {http://www.stat.washington.edu/research/reports/2007/tr517.pdf}
}
@article{hoff_2008_isba,
  title = {Rank Likelihood Estimation for Continuous and Discrete Data},
  author = {Hoff, P.D.},
  journal = {ISBA Bulletin},
  volume = {15},
  number = {1},
  pages = {8-10},
  year = {2008},
  pdf = {http://www.bayesian.org/bulletin/0803.pdf},
  url = { http://www.stat.washington.edu/hoff/Code/hoff_2008_isba}
}
@incollection{hoff_2008_nips,
  title = {Modeling homophily and stochastic equivalence in symmetric relational data},
  author = {Hoff, P.D.},
  booktitle = {Advances in Neural Information Processing Systems 20},
  editor = {J.C. Platt and D. Koller and Y. Singer and S. Roweis},
  publisher = {MIT Press},
  address = {Cambridge, MA},
  pages = {657--664},
  year = {2008},
  apdf = {http://books.nips.cc/papers/files/nips20/NIPS2007_0587.pdf},
  eprint = {arXiv:0711.1146},
  url = { http://cran.r-project.org/web/packages/eigenmodel/}
}
@incollection{ward_hoff_2008_ccm,
  author = {Ward, M.D. and Hoff, P.D.},
  title = {Analyzing Dependencies in Geo-Economics and Geo-Politics},
  booktitle = {War, Peace and Security},
  pages = {133--160},
  address = {Bingley, UK},
  publisher = {Emerald Group Publishing},
  pdf = {http://www.duke.edu/web/methods/pdfs/mannheim.pdf},
  year = {2008}
}
@article{logan_hoff_newton_2008,
  author = {Logan, J.A. and Hoff, P.D. and Newton, M.A.},
  title = {Two-sided estimation of mate preferences for similarities in
              age, education, and religion},
  journal = {J. Amer. Statist. Assoc.},
  fjournal = {Journal of the American Statistical Association},
  volume = {103},
  year = {2008},
  number = {482},
  pages = {559--569},
  issn = {0162-1459},
  coden = {JSTNAL},
  mrclass = {Database Expansion Item},
  mrnumber = {2523993},
  pdf = {http://www.csss.washington.edu/Papers/wp15.pdf}
}
@article{hoff_2007_jrssa,
  title = {Discussion of "{M}odel-Based Clustering for Social Networks", by {H}andcock, {R}aftery and {T}antrum},
  author = {Hoff, P.D.},
  journal = {Journal of the Royal Statistical Society, Series A},
  volume = {170},
  number = {2},
  pages = {339},
  year = {2007},
  pdf = {http://www.stat.washington.edu/hoff/Preprints/disc_hrt_jrssa.pdf}
}
@techreport{oron_hoff_2007_tr,
  title = {{K}ruskal-{W}allis and {F}riedman type tests for nested effects in hierarchical designs},
  author = {Oron, A.P. and Hoff, P.D.},
  institution = {Center for Statistics and the Social Sciences, University of Washington},
  year = {2007},
  number = {68},
  pdf = {http://www.csss.washington.edu/Papers/wp68.pdf}
}
@article{pearson2007randomized,
  title = {Randomized control trial of peer-delivered, modified directly observed therapy for {HAART} in Mozambique},
  author = {Pearson, C.R. and Micek, M.A. and Simoni, J.M. and Hoff, P.D. and Matediana, E. and Martin, D.P. and Gloyd, S.S.},
  journal = {JAIDS Journal of Acquired Immune Deficiency Syndromes},
  volume = {46},
  number = {2},
  pages = {238},
  issn = {1525-4135},
  year = {2007}
}
@article{pearson2007assessing,
  title = {Assessing antiretroviral adherence via electronic drug monitoring and self-report: an examination of key methodological issues},
  author = {Pearson, C.R. and Simoni, J.M. and Hoff, P. and Kurth, A.E. and Martin, D.P.},
  journal = {AIDS and Behavior},
  volume = {11},
  number = {2},
  pages = {161--173},
  issn = {1090-7165},
  year = {2007},
  publisher = {Springer}
}
@article{pearson2007modeling,
  title = {Modeling {HIV} transmission risk among Mozambicans prior to their initiating highly active antiretroviral therapy},
  author = {Pearson, CR and Kurth, AE and Cassels, S. and Martin, DP and Simoni, JM and Hoff, P. and Matediana, E. and Gloyd, S.},
  journal = {AIDS care},
  volume = {19},
  number = {5},
  pages = {594--604},
  issn = {0954-0121},
  year = {2007},
  publisher = {Routledge}
}
@article{ward_hoff_2007_jpr,
  title = {Persistent patterns of international commerce},
  author = {Ward, M.D. and Hoff, P.D.},
  journal = {Journal of Peace Research},
  volume = {44},
  number = {2},
  pages = {157},
  issn = {0022-3433},
  year = {2007},
  publisher = {Sage Publications},
  pdf = {http://www.csss.washington.edu/Papers/wp45.pdf}
}
@article{hoff_2007_aoas,
  author = {Hoff, P.D.},
  title = {Extending the rank likelihood for semiparametric copula
              estimation},
  journal = {Ann. Appl. Stat.},
  fjournal = {The Annals of Applied Statistics},
  volume = {1},
  year = {2007},
  number = {1},
  pages = {265--283},
  issn = {1932-6157},
  mrclass = {Database Expansion Item},
  mrnumber = {2393851},
  eprint = {arXiv:math/0610413},
  url = { http://cran.r-project.org/web/packages/sbgcop/}
}
@article{hoff_2007_jasa,
  author = {Hoff, P.D.},
  title = {Model averaging and dimension selection for the singular value
              decomposition},
  journal = {J. Amer. Statist. Assoc.},
  fjournal = {Journal of the American Statistical Association},
  volume = {102},
  year = {2007},
  number = {478},
  pages = {674--685},
  issn = {0162-1459},
  coden = {JSTNAL},
  mrclass = {62H05 (62H25)},
  mrnumber = {2325118},
  eprint = {arXiv:math/0609042},
  url = { http://www.stat.washington.edu/hoff/Code/hoff_2007_jasa}
}
@article{shortreed_handcock_hoff_2006_meth,
  title = {Positional estimation within a latent space model for networks},
  author = {Shortreed, S. and Handcock, M.S. and Hoff, P.},
  journal = {Methodology: European Journal of Research Methods for the Behavioral and Social Sciences},
  volume = {2},
  number = {1},
  pages = {24--33},
  issn = {1614-1881},
  year = {2006},
  publisher = {Hogrefe \& Huber},
  pdf = {http://www.csss.washington.edu/Papers/wp41.pdf},
  url = { http://cran.r-project.org/web/packages/latentnet/}
}
@article{hoff_2006,
  author = {Hoff, P.D.},
  title = {Model-based subspace clustering},
  journal = {Bayesian Anal.},
  fjournal = {Bayesian Analysis},
  volume = {1},
  year = {2006},
  number = {2},
  pages = {321--344 (electronic)},
  mrclass = {Database Expansion Item},
  mrnumber = {2221267},
  pdf = {http://ba.stat.cmu.edu/journal/2006/vol01/issue02/hoff321-344.pdf},
  url = { http://www.stat.washington.edu/hoff/Code/hoff_2006}
}
@techreport{koprowicz_emerson_hoff_2005_tr,
  title = {A Comparison of Parametric and Coarsened Bayesian Interval Estimation in the Presence of a Known Mean-Variance Relationship},
  author = {Koprowicz, K. and Emerson, S.E. and Hoff, P.D.},
  institution = {Department of Biotatistics, University of Washington},
  year = {2005},
  number = {251},
  pdf = {http://www.bepress.com/uwbiostat/paper251}
}
@article{hoff_2005_biometrics,
  author = {Hoff, P.D.},
  title = {Subset clustering of binary sequences, with an application to
              genomic abnormality data},
  journal = {Biometrics},
  fjournal = {Biometrics. Journal of the International Biometric Society},
  volume = {61},
  year = {2005},
  number = {4},
  pages = {1027--1036},
  issn = {0006-341X},
  mrclass = {Database Expansion Item},
  mrnumber = {2216196},
  pdf = {http://www.stat.washington.edu/research/reports/2004/tr456.pdf},
  url = { http://www.stat.washington.edu/hoff/Code/hoff_2005_biometrics}
}
@article{hoff_2005_jasa,
  author = {Hoff, P.D.},
  title = {Bilinear mixed-effects models for dyadic data},
  journal = {J. Amer. Statist. Assoc.},
  fjournal = {Journal of the American Statistical Association},
  volume = {100},
  year = {2005},
  number = {469},
  pages = {286--295},
  issn = {0162-1459},
  coden = {JSTNAL},
  mrclass = {62F15 (62J12)},
  mrnumber = {2156838},
  pdf = {http://www.stat.washington.edu/research/reports/2003/tr430.pdf},
  url = { http://www.stat.washington.edu/hoff/Code/hoff_2005_jasa}
}
@inproceedings{westveld_hoff_2005_apsa,
  author = {Westveld, A.H. and Hoff, P.D.},
  title = {Statistical Methodology for Longitudinal Social Network Data},
  booktitle = {Annual Meeting of the American Political Science Association},
  organization = {American Political Science Association},
  address = {Washington, D.C.},
  month = {September},
  year = {2005},
  pdf = {http://www.allacademic.com/meta/p40209_index.html}
}
@inproceedings{hoff_ward_2005_isa,
  author = {Hoff, P.D. and Ward, M.D.},
  title = {Analyzing Dependencies in International Relations: Commerce, Capitalism, Conflict, Cooperation, and Democracy},
  booktitle = {Annual Meeting of the International Studies Association },
  organization = {International Studies Association},
  address = {Honolulu},
  month = {March},
  year = {2005},
  pdf = {http://www.allacademic.com/meta/p71980_index.html}
}
@article{hoff_2004_jrssb,
  title = {Discussion of "{C}lustering Objects on Subsets of Attributes", by {F}riedman and {M}eulman},
  author = {Hoff, P.D.},
  journal = {Journal of the Royal Statistical Society, Series B},
  volume = {66},
  number = {4},
  pages = {845},
  year = {2004},
  pdf = {http://www.stat.washington.edu/hoff/Preprints/cosa.disc.pdf},
  url = { http://www.stat.washington.edu/hoff/Code/hoff_2004_jrssb}
}
@inproceedings{hoff_ward_2004_isa,
  author = {Hoff, P.D. and Ward, M.D.},
  title = {Random, Latent, and Correlated: Networks in International Relations},
  booktitle = {Annual Meeting of the International Studies Association },
  organization = {International Studies Association},
  address = {Montreal},
  month = {March},
  year = {2004},
  pdf = { http://www.allacademic.com/meta/p72858_index.html}
}
@article{haigis_2004_pnas,
  title = {Tumor regionality in the mouse intestine reflects the mechanism of loss of {APC} function},
  author = {Haigis, K.M. and Hoff, P.D. and White, A. and Shoemaker, A.R. and Halberg, R.B. and Dove, W.F.},
  journal = {Proceedings of the National Academy of Sciences of the United States of America},
  volume = {101},
  number = {26},
  pages = {9769},
  year = {2004},
  publisher = {National Acad Sciences}
}
@article{hoff_2004_pa,
  title = {Modeling dependencies in international relations networks},
  author = {Hoff, P.D. and Ward, M.D.},
  journal = {Political Analysis},
  volume = {12},
  number = {2},
  pages = {160},
  issn = {1047-1987},
  year = {2004},
  publisher = {SPM-PMSAPSA}
}
@inproceedings{hoff_2003_nap,
  title = {Random effects models for network data},
  author = {Hoff, P.D.},
  booktitle = {Dynamic Social Network Modeling and Analysis: Workshop Summary and Papers},
  pages = {303--312},
  year = {2003},
  organization = {The National Academies Press}
}
@inproceedings{ward_hoff_lofdahl_2003_nap,
  title = {Identifying international networks: latent spaces and imputation},
  author = {Ward, M.D and Hoff, P.D. and Lofdahl, C.L.},
  booktitle = {Dynamic Social Network Modeling and Analysis: Workshop Summary and Papers},
  pages = {345-362},
  isbn = {0309089522},
  year = {2003},
  organization = {The National Academies Press}
}
@article{hoff_2003_biometrika,
  author = {Hoff, P.D.},
  title = {Bayesian methods for partial stochastic orderings},
  journal = {Biometrika},
  fjournal = {Biometrika},
  volume = {90},
  year = {2003},
  number = {2},
  pages = {303--317},
  issn = {0006-3444},
  coden = {BIOKAX},
  mrclass = {62C10 (60E15)},
  mrnumber = {1986648 (2004d:62017)},
  pdf = {http://www.stat.washington.edu/research/reports/2002/tr408.pdf}
}
@article{hoff_2003_aos,
  author = {Hoff, P.D.},
  title = {Nonparametric estimation of convex models via mixtures},
  journal = {Ann. Statist.},
  fjournal = {The Annals of Statistics},
  volume = {31},
  year = {2003},
  number = {1},
  pages = {174--200},
  issn = {0090-5364},
  coden = {ASTSC7},
  mrclass = {62G07 (62C10)},
  mrnumber = {1962503 (2004d:62152)},
  mrreviewer = {Bruno Betr{\`o}},
  pdf = {http://www.stat.washington.edu/research/reports/2001/tr393.pdf}
}
@techreport{hoff_2003_tr,
  title = {Nonparametric Modeling of Hierarchically Exchangeable Data},
  author = {Hoff, P.D.},
  institution = {Department of Statistics, University of Washington},
  year = {2003},
  number = {421},
  pdf = {http://www.stat.washington.edu/research/reports/2003/tr421.pdf}
}
@article{hoff_raftery_handcock_2002_jasa,
  author = {Hoff, P.D. and Raftery, A.E. and Handcock, M.S.},
  title = {Latent space approaches to social network analysis},
  journal = {J. Amer. Statist. Assoc.},
  fjournal = {Journal of the American Statistical Association},
  volume = {97},
  year = {2002},
  number = {460},
  pages = {1090--1098},
  issn = {0162-1459},
  coden = {JSTNAL},
  mrclass = {62P15 (62F10 62F15)},
  mrnumber = {1951262},
  pdf = {http://www.stat.washington.edu/research/reports/2001/tr399.pdf},
  url = { http://www.stat.washington.edu/hoff/Code/hoff_raftery_handcock_2002_jasa}
}
@incollection{hoff_halberg_shedlovsky_dove_newton_2002_csbs,
  author = {Hoff, P.D. and Halberg, R.B. and Shedlovsky,
              A. and Dove, W.F. and Newton, M.A.},
  title = {Identifying carriers of a genetic modifier using nonparametric
              {B}ayesian methods},
  booktitle = {Case studies in {B}ayesian statistics, {V}ol.\ {V}
              ({P}ittsburgh, {PA}, 1999)},
  series = {Lecture Notes in Statist.},
  volume = {162},
  pages = {329--330},
  publisher = {Springer},
  address = {New York},
  year = {2002},
  mrclass = {62G05 (62P10)},
  mrnumber = {1931873}
}
@article{halberg2000tumorigenesis,
  title = {Tumorigenesis in the multiple intestinal neoplasia mouse: redundancy of negative regulators and specificity of modifiers},
  author = {Halberg, R.B. and Katzung, D.S. and Hoff, P.D. and Moser, A.R. and Cole, C.E. and Lubet, R.A. and Donehower, L.A. and Jacoby, R.F. and Dove, W.F.},
  journal = {Proceedings of the National Academy of Sciences of the United States of America},
  volume = {97},
  number = {7},
  pages = {3461},
  year = {2000},
  publisher = {National Acad Sciences}
}
@article{hoff_2000_jcgs,
  author = {Hoff, P.D.},
  title = {Constrained nonparametric maximum likelihood via mixtures},
  journal = {J. Comput. Graph. Statist.},
  fjournal = {Journal of Computational and Graphical Statistics},
  volume = {9},
  year = {2000},
  number = {4},
  pages = {633--641},
  issn = {1061-8600},
  mrclass = {62G05 (62P10)},
  mrnumber = {1821811 (2002a:62046)},
  pdf = {http://www.jstor.org/pss/1391084}
}
@phdthesis{hoff_2000_thesis,
  author = {Hoff, P.D.},
  title = {Constrained Nonparametric Estimation via Mixtures},
  school = {University of Wisconsin-Madison},
  address = {Madison, Wisconsin},
  year = {2000}
}
@article{shepel1998genetic,
  title = {Genetic identification of multiple loci that control breast cancer susceptibility in the rat},
  author = {Shepel, L.A. and Lan, H. and Haag, J.D. and Brasic, G.M. and Gheen, M.E. and Simon, J.S. and Hoff, P. and Newton, M.A. and Gould, M.N.},
  journal = {Genetics},
  volume = {149},
  number = {1},
  pages = {289},
  year = {1998},
  publisher = {Genetics Soc America}
}