Publications and Pre-prints
Ptak et al (2004). Absence of the TAP2 human recombination hotspot in chimpanzees. PLoS Biology 2: 849-855.
Crawford et al (2004). Evidence for substantial fine-scale variation in recombination rates across the human genome. Nature Genetics, 36:700-706.
Li, N., and Stephens, M. (2003). Modelling Linkage Disequilibrium, and identifying recombination hotspots using SNP data Genetics, 165:2213-2233.
Stephens, M., and Donnelly, P. (2003). A comparison of Bayesian methods for haplotype reconstruction from population genotype data. American Journal of Human Genetics, 73:1162-1169.
Falush, D., Stephens, M. and Pritchard, J.K. (2003). Inference of Population Structure Using Multilocus Genotype Data: Linked Loci and Correlated Allele Frequencies. Genetics 164: 1567-1587.
Stephens, M. and Donnelly, P. (2003). Ancestral inference in population genetics models with selection. Australian and New Zealand Journal of Statistics, 45 , 901--931.
Stephens, M., Smith, N., and Donnelly, P. (2001). A new statistical method for haplotype reconstruction from population data. American Journal of Human Genetics, 68, 978--989.
Pritchard, J.K., Stephens, M. and Donnelly, P. (2000). Inference of population structure using multilocus genotype data. Genetics, 155, 945--959.
Pritchard, J.K., Stephens, M., Rosnberg N.A. and Donnelly, P. (2000). Association mapping in structured populations. American Journal of Human Genetics, 67, 170--181.
Stephens, M. (2000). Bayesian analysis of mixtures with an unknown number of components --- an alternative to reversible jump methods. Annals of Statistics, 28.[Abstract][compressed postscript][postscript]
Stephens, M. (1999). Problems with computational methods in population genetics. Bulletin of the 52nd Session of the International Statistical Institute (invited paper). [postscript].
Stephens, M. (1997). Contribution to the discussion of Richardson and Green (1997), On Bayesian analysis of mixtures with an unknown number of components. Journal of the Royal Statistical Society, series B, 59, 768--769.
D. Phil. Thesis:
Diploma in Mathematical Statistics Thesis - written in Cambridge:
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