Some of these publications are NIH grant related, and some are not.
NIH-grant papers|| Other on-line publications

Online Journal Articles (NIH-grant related)

2008:

The IBD process along four chromosomes.

E. A. Thompson

Theoretical Population Biology 73: 369--373. (Online Nov 2007, for 73 (Issue 3), May 2008)

Multilocus lod scores in large pedigrees: Combination of exact and approximate calculations

Liping Tong and E. A. Thompson

Human Heredity, 65: 142--153 (Online Oct 2007, for No. 3. 2008)

2007:

Comparison of multipoint linkage analyses for quantitative traits in the CEPH data: parametric LOD scores, variance components LOD scores, and Bayes factors

Yun Ju Sung, Yanming Di, Audrey Q Fu, Joseph H Rothstein, Weiva Sieh, Liping Tong, Elizabeth A Thompson, and Ellen M Wijsman

BMC Proceedings 2007, 1(Suppl 1): S93.

Summary of Genetic Analysis Workshop 15: Group 9 linkage analysis of the CEPH expression data

Ellen M. Wijsman, Yun Ju Sung, Alfonso Buil, on behalf of Group 9

Genetic Epidemiology, 31: (Issue S1), S75-S85.

Fuzzy p-values in latent variable problems

Elizabeth A Thompson and Charles J Geyer

Biometrika, 94: 49--60 (March 2007)

Accounting for epistasis in linkage analysis of general pedigrees

Yun Ju Sung and Ellen M. Wijsman

Human Heredity, 63: 144--152 (Feb 2007)

MCMC-based linkage analysis for complex traits on general pedigrees: multipoint analysis with a two-locus model and a polygenic component

Yun Ju Sung, Elizabeth A. Thompson, Ellen M. Wijsman

Genetic Epidemiology, 31: 103--114 (Feb 2007)

2006:

Multipoint linkage analysis with many multiallelic or dense diallelic markers: Markov chain Monte Carlo provides practical approaches for genome scans on general pedigrees

Ellen M. Wijsman, Joseph H. Rothstein, and Elizabeth A. Thompson

American Journal of Human Genetics, 79: 846--858 (Nov 2006)

Improving estimates of genetic maps: A maximum likelihood approach

Stewart, W. C. L. and Thompson, E. A.

Biometrics 62: 728--734. (Sept 2006)

2005:

Comment: Fuzzy and Randomized Confidence Intervals and P-Values`

Thompson, E. A.

Statistical Science, 20: 382--3831 (Nov 2005)

MCMC Multilocus Lod Scores: Application of a New Approach

George, A. W., Wijsman E. M., and Thompson, E. A.

Human Heredity, 59: 98--108 (April 2005)

2002, 2003:

Discovering Disease Genes: Multipoint Linkage Analysis via a New Markov Chain Monte Carlo Approach

George, A. W. and Thompson, E. A.

Statistical Science, 18: 515--531 (Dec 2003)

Genome Sharing in Large Pedigrees: Multiple Imputation of ibd for Linkage Detection

Thompson, E. A., and Basu, S.

Human Heredity, 56: 119--125 (November 2003)

(Also available as ISBN 3-8055-7676-5.)

Estimation of the inbreeding coefficient through use of genomic data.

Leutenegger, A.-L., Prum, B., Genin, E., Verny, C., Lemainque, A., Clerget-Darpoux, F., and Thompson, E.A.

American Journal of Human Genetics, 73: 515-531 (September 2003)

A score for Bayesian genome screening

E. Warwick Daw, Ellen M. Wijsman, Elizabeth A. Thompson

Genetic Epidemiology, 24: 181--190 (April 2003)

Relationship inference from trios of individuals in the presence of typing error

Sieberts, S., Wijsman, E.M., and Thompson, E. A.

American Journal of Human Genetics, 70: 170--180 (January 2002)

2000 and earlier:

Bias in multipoint linkage analysis arising from map misspecification

E. Warwick Daw, Elizabeth A. Thompson, Ellen M. Wijsman

Genetic Epidemiology, 19: 366--380 (Dec 2000)

A Coalescent Model of Ancestry for a Rare Allele.

Jinko Graham and Elizabeth A. Thompson

Genetics, 156: 375--384. (September 2000)

The Number of Trait Loci in Late-Onset Alzheimer Disease.

E. Warwick Daw, Haydeh Payami, Ellen J. Nemens, David Nochlin, Thomas D. Bird, Gerard D. Schellenberg, and Ellen M. Wijsman

American Journal of Human Genetics, 66: 196--204. (January 2000)

Multipoint Oligogenic Analysis of Age-at-Onset Data with Applications to Alzheimer Disease Pedigrees

E. Warwick Daw, Simon C. Heath, Ellen M. Wijsman

American Journal of Human Genetics, 64: 839-852 (March 1999)

Disequilibrium Likelihoods for Fine-Scale Mapping of a Rare Allele

Jinko Graham, Elizabeth Thompson.

American Journal of Human Genetics, 63: 1517-1530 (November 1998)

Online Journal Articles ( other)

Estimation of the inbreeding coefficient through use of genomic data.

Leutenegger, A., Prum, B., Genin, E., Verny, C., Clerget-Darpoux, F., and Thompson, E. A.

American Journal of Human Genetics 73: 516--523. (September 2003)

A model for the length of tracts of identity by descent in finite random mating populations.

Nicola H. Chapman and Elizabeth A. Thompson

Theoretical Population Biology 64: 141--150. (September 2003)

The effect of population history on the lengths of ancestral chromosome segments.

Nicola H. Chapman and Elizabeth A. Thompson

Genetics, 162: 449--458. (September 2002)

A model-based method for identifying species hybrids using multilocus genetic data

Eric C. Anderson and Elizabeth A. Thompson

Genetics, 160: 1217-1229. (March 2002)

Monte Carlo evaluation of the likelihood for N_e from temporally spaced samples

Eric C. Anderson, Ellen G. Williamson, and Elizabeth A. Thompson

Genetics, 156: 2109-2118. (December 2000)