P.D. Hoff.
**Limitations on detecting row covariance in the presence of
column covariance**.
Technical Report 640, Department of Statistics, University of
Washington, 2015.
[ bib |
arXiv |
code ]

J.W. Harmon and P.D. Hoff.
**A Pivot-Based Improvement to Sandwich-Based Confidence
Intervals**.
Technical Report 639, Department of Statistics, University of
Washington, 2015.
[ bib |
arXiv ]

P.D. Hoff.
**Dyadic data analysis with amen**.
Technical Report 638, Department of Statistics, University of
Washington, 2015.
[ bib |
arXiv ]

D. Gerard and P.D. Hoff.
**Adaptive Higher-order Spectral Estimators**.
Technical Report 633, Department of Statistics, University of
Washington, 2015.
[ bib |
arXiv ]

S. Minhas, P.D. Hoff, and M.D. Ward.
**Relax, Tensors Are Here: Dependencies in International
Processes**, 2015.
[ bib |
arXiv ]

D.C. Kessler, P.D. Hoff, and D.B. Dunson.
**Marginally specified priors for non-parametric Bayesian
estimation**.
*J. R. Stat. Soc. Ser. B. Stat. Methodol.*, 77(1):35–58, 2015.
[ bib |
DOI |
http ]

P.D. Hoff.
**Multilinear tensor regression for longitudinal relational data**.
*Ann. Appl. Stat.*, 9(3):1169–1193, 2015.
[ bib |
arXiv |
code ]

D. Gerard and P. Hoff.
**Equivariant minimax dominators of the MLE in the array normal
model**.
*J. Multivariate Anal.*, 137:32–49, 2015.
[ bib |
DOI |
arXiv |
http ]

A. Volfovsky and P.D. Hoff.
**Testing for Nodal Dependence in Relational Data Matrices**.
*J. Amer. Statist. Assoc.*, 110(511):1037–1046, 2015.
[ bib |
arXiv ]

B.K. Fosdick and P.D. Hoff.
**Testing and Modeling Dependencies Between a Network and Nodal
Attributes**.
*J. Amer. Statist. Assoc.*, 110(511):1047–1056, 2015.
[ bib |
arXiv ]

D. Gerard and P.D. Hoff.
**A higher-order LQ decomposition for separable covariance
models**.
Technical Report 627, Department of Statistics, University of
Washington, 2014.
[ bib |
arXiv ]

P.D. Hoff, X. Niu, and J.A. Wellner.
**Information bounds for Gaussian copulas**.
*Bernoulli*, 20(2):604–622, 2014.
[ bib |
arXiv ]

B.K. Fosdick and P.D. Hoff.
**Separable factor analysis with applications to mortality data**.
*Ann. Appl. Stat.*, 8(1):120–147, 2014.
[ bib |
arXiv ]

A. Volfovsky and P.D. Hoff.
**Hierarchical array priors for ANOVA decompositions of
cross-classified data**.
*Ann. Appl. Stat.*, 8(1):19–47, 2014.
[ bib |
arXiv |
code ]

D.C. Kessler, P.D. Hoff, and D.B. Dunson.
**Marginally Specified Priors for Nonparametric Bayesian
Estimation**.
*Journal of the Royal Statistical Society, Series B*,
77(1):35–58, 2014.
[ bib |
arXiv |
code ]

P.D. Hoff.
**Equivariant and scale-free Tucker decomposition models**.
Technical Report 623, Department of Statistics, University of
Washington, 2013.
To appear in *Bayesian Analysis*.
[ bib |
arXiv |
code ]

X. Niu and P.D. Hoff.
**Simultaneous Mean and Covariance Modeling of Chronic Kidney
Disease**, 2013.
[ bib |
arXiv ]

A.H. Westveld and P.D. Hoff.
**Modeling of the learning process in centipede games**.
*Stat*, 2(1):242–254, 2013.
[ bib |
arXiv ]

P.D. Hoff, B.K. Fosdick, A. Volfovsky, and K. Stovel.
**Likelihoods for fixed rank nomination networks**.
*Network Science*, 1(3):253–277, 2013.
[ bib |
arXiv |
code ]

P.D. Hoff.
**Bayesian analysis of matrix data with rstiefel**.
R-vignette, 2013.
[ bib |
arXiv ]

P.D. Hoff.
**Comment on “Bayesian Nonparametric Inference - Why and How” by
Müller and Mitra**.
*Bayesian Analysis*, 8(2):311–318, 2013.
[ bib |
arXiv ]

P.D. Hoff and J. Wakefield.
**Bayesian sandwich posteriors for pseudo-true parameters**.
*J. Statist. Plann. Inference*, 143(10):1638–1642, 2013.
[ bib |
arXiv |
code ]

A.P. Oron and P.D. Hoff.
**Small-Sample Behavior of Novel Phase I Cancer Trial Designs**.
*Clinical Trials*, 10(1):63–80, 2013.
[ bib |
arXiv ]

P.D. Hoff, B.K. Fosdick, A. Volfovsky, and K. Stovel.
*amen: Additive and multiplicative effects modeling of networks
and relational data*, 2012.
[ bib |
software ]

P.D. Hoff.
*rstiefel: Random orthonormal matrix generation on the Stiefel
manifold*, 2012.
[ bib |
software ]

A.E. Raftery, X. Niu, P.D. Hoff, and K.Y. Yeung.
**Fast Inference for the Latent Space Network Model Using a
Case-Control Approximate Likelihood**.
*Journal of Computational and Graphical Statistics*, 21:901–919,
2012.
[ bib |
pdf ]

P.D. Hoff and X. Niu.
**A Covariance Regression Model**.
*Statistica Sinica*, 22:729–753, 2012.
[ bib |
arXiv |
code ]

P.D. Hoff.
**Hierarchical multilinear models for multiway data**.
*Computational Statistics & Data Analysis*, 55:530–543, 2011.
[ bib |
arXiv |
code ]

P.D. Hoff.
**Separable covariance arrays via the Tucker product, with
applications to multivariate relational data**.
*Bayesian Analysis*, 6:179–196, 2011.
[ bib |
arXiv |
code ]

A.H. Westveld and P.D. Hoff.
**A Mixed Effects Model for Longitudinal Relational and Network
Data, with Applications to International Trade and Conflict**.
*Annals of Applied Statistics*, 5:843–872, 2011.
[ bib |
arXiv ]

A.P. Oron, D. Azriel, and P.D. Hoff.
**Dose-finding designs: the role of convergence properties**.
*International Journal of Biostatistics*, 7(1):article 39, 2011.
[ bib |
arXiv ]

M.P. Bronner, M. Skacel, D.A. Crispin, P.D. Hoff, M.J. Emond, L.A. Lai, R.R.
Tubbs, J.N. O'Sullivan, P.S. Rabinovitch, and T.A. Brentnall.
**Array-based comparative genomic hybridization in ulcerative
colitis neoplasia: single non-dysplastic biopsies distinguish progressors
from non-progressors**.
*Modern Pathology*, 23:1624–1633, 2010.
[ bib ]

P.D. Hoff.
**Multiplicative latent factor models for description and
prediction of social networks**.
*Computational & Mathematical Organization Theory*,
15(4):261–272, 2009.
[ bib |
pdf ]

P.D. Hoff.
*A first course in Bayesian statistical methods*.
Springer Texts in Statistics. Springer, New York, 2009.
[ bib |
web ]

P.D. Hoff.
**Simulation of the Matrix Bingham-von Mises-Fisher
Distribution, With Applications to Multivariate and Relational
Data**.
*Journal of Computational and Graphical Statistics*,
18(2):438–456, 2009.
[ bib |
arXiv |
code ]

P.D. Hoff.
**A Hierarchical Eigenmodel for Pooled Covariance Estimation**.
*Journal of the Royal Statistical Society, Series B*,
71(5):971–992, 2009.
[ bib |
arXiv |
code ]

A.P. Oron and P.D. Hoff.
**The k-in-a-row Up-and-down Design, Revisited**.

*Statistics in Medicine*, 28(13):1805–1820, 2009. [ bib ]

P.N. Krivitsky, M.S. Handcock, A.E. Raftery, and P.D. Hoff.
**Representing degree distributions, clustering, and homophily in
social networks with latent cluster random effects models**.
*Social networks*, 31(3):204–213, 2009.
[ bib |
pdf ]

P.D. Hoff.
**Rank Likelihood Estimation for Continuous and Discrete Data**.
*ISBA Bulletin*, 15(1):8–10, 2008.
[ bib |
pdf |
code ]

P.D. Hoff.
**Modeling homophily and stochastic equivalence in symmetric
relational data**.
In J.C. Platt, D. Koller, Y. Singer, and S. Roweis, editors, *
Advances in Neural Information Processing Systems 20*, pages 657–664. MIT
Press, Cambridge, MA, 2008.
[ bib |
arXiv |
pdf |
software ]

M.D. Ward and P.D. Hoff.
**Analyzing Dependencies in Geo-Economics and Geo-Politics**.
In *War, Peace and Security*, pages 133–160. Emerald Group
Publishing, Bingley, UK, 2008.
[ bib |
pdf ]

J.A. Logan, P.D. Hoff, and M.A. Newton.
**Two-sided estimation of mate preferences for similarities in
age, education, and religion**.
*J. Amer. Statist. Assoc.*, 103(482):559–569, 2008.
[ bib |
pdf ]

P.D. Hoff.
*sbgcop: Semiparametric Bayesian Gaussian copula estimation and
imputation*, 2007.
[ bib |
software ]

P.D. Hoff.
*eigenmodel: Semiparametric factor and regression models for
symmetric relational data*, 2007.
[ bib |
software ]

P.D. Hoff.
**Discussion of "Model-Based Clustering for Social Networks", by
Handcock, Raftery and Tantrum**.
*Journal of the Royal Statistical Society, Series A*, 170(2):339,
2007.
[ bib |
pdf ]

A.P. Oron and P.D. Hoff.
**Kruskal-Wallis and Friedman type tests for nested effects
in hierarchical designs**.
Technical Report 68, Center for Statistics and the Social Sciences,
University of Washington, 2007.
[ bib |
pdf ]

C.R. Pearson, M.A. Micek, J.M. Simoni, P.D. Hoff, E. Matediana, D.P. Martin,
and S.S. Gloyd.
**Randomized control trial of peer-delivered, modified directly
observed therapy for HAART in Mozambique**.
*JAIDS Journal of Acquired Immune Deficiency Syndromes*,
46(2):238, 2007.
[ bib ]

C.R. Pearson, J.M. Simoni, P. Hoff, A.E. Kurth, and D.P. Martin.
**Assessing antiretroviral adherence via electronic drug
monitoring and self-report: an examination of key methodological issues**.
*AIDS and Behavior*, 11(2):161–173, 2007.
[ bib ]

CR Pearson, AE Kurth, S. Cassels, DP Martin, JM Simoni, P. Hoff, E. Matediana,
and S. Gloyd.
**Modeling HIV transmission risk among Mozambicans prior to
their initiating highly active antiretroviral therapy**.
*AIDS care*, 19(5):594–604, 2007.
[ bib ]

M.D. Ward and P.D. Hoff.
**Persistent patterns of international commerce**.
*Journal of Peace Research*, 44(2):157, 2007.
[ bib |
pdf ]

P.D. Hoff.
**Extending the rank likelihood for semiparametric copula
estimation**.
*Ann. Appl. Stat.*, 1(1):265–283, 2007.
[ bib |
arXiv |
software ]

P.D. Hoff.
**Model averaging and dimension selection for the singular value
decomposition**.
*J. Amer. Statist. Assoc.*, 102(478):674–685, 2007.
[ bib |
arXiv |
code ]

S. Shortreed, M.S. Handcock, and P. Hoff.
**Positional estimation within a latent space model for networks**.
*Methodology: European Journal of Research Methods for the
Behavioral and Social Sciences*, 2(1):24–33, 2006.
[ bib |
pdf |
software ]

P.D. Hoff.
**Model-based subspace clustering**.
*Bayesian Anal.*, 1(2):321–344, 2006.
[ bib |
pdf |
code ]

A.H. Westveld and P.D. Hoff.
**Statistical Methodology for Longitudinal Social Network Data**.
In *Annual Meeting of the American Political Science
Association*, Washington, D.C., September 2005. American Political Science
Association.
[ bib |
pdf ]

P.D. Hoff and M.D. Ward.
**Analyzing Dependencies in International Relations: Commerce,
Capitalism, Conflict, Cooperation, and Democracy**.
In *Annual Meeting of the International Studies Association*,
Honolulu, March 2005. International Studies Association.
[ bib |
pdf ]

K. Koprowicz, S.E. Emerson, and P.D. Hoff.
**A Comparison of Parametric and Coarsened Bayesian Interval
Estimation in the Presence of a Known Mean-Variance Relationship**.
Technical Report 251, Department of Biotatistics, University of
Washington, 2005.
[ bib |
pdf ]

P.D. Hoff.
**Subset clustering of binary sequences, with an application to
genomic abnormality data**.
*Biometrics*, 61(4):1027–1036, 2005.
[ bib |
pdf |
code ]

P.D. Hoff.
**Bilinear mixed-effects models for dyadic data**.
*J. Amer. Statist. Assoc.*, 100(469):286–295, 2005.
[ bib |
pdf |
code ]

P.D. Hoff and M.D. Ward.
**Random, Latent, and Correlated: Networks in International
Relations**.
In *Annual Meeting of the International Studies Association*,
Montreal, March 2004. International Studies Association.
[ bib |
pdf ]

P.D. Hoff.
**Discussion of "Clustering Objects on Subsets of Attributes",
by Friedman and Meulman**.
*Journal of the Royal Statistical Society, Series B*, 66(4):845,
2004.
[ bib |
pdf |
code ]

K.M. Haigis, P.D. Hoff, A. White, A.R. Shoemaker, R.B. Halberg, and W.F. Dove.
**Tumor regionality in the mouse intestine reflects the mechanism
of loss of APC function**.
*Proceedings of the National Academy of Sciences of the United
States of America*, 101(26):9769, 2004.
[ bib ]

P.D. Hoff and M.D. Ward.
**Modeling dependencies in international relations networks**.
*Political Analysis*, 12(2):160, 2004.
[ bib ]

P.D. Hoff.
**Random effects models for network data**.
In *Dynamic Social Network Modeling and Analysis: Workshop
Summary and Papers*, pages 303–312. The National Academies Press, 2003.
[ bib ]

M.D Ward, P.D. Hoff, and C.L. Lofdahl.
**Identifying international networks: latent spaces and
imputation**.
In *Dynamic Social Network Modeling and Analysis: Workshop
Summary and Papers*, pages 345–362. The National Academies Press, 2003.
[ bib ]

P.D. Hoff.
**Bayesian methods for partial stochastic orderings**.
*Biometrika*, 90(2):303–317, 2003.
[ bib |
pdf ]

P.D. Hoff.
**Nonparametric estimation of convex models via mixtures**.
*Ann. Statist.*, 31(1):174–200, 2003.
[ bib |
pdf ]

P.D. Hoff.
**Nonparametric Modeling of Hierarchically Exchangeable Data**.
Technical Report 421, Department of Statistics, University of
Washington, 2003.
[ bib |
pdf ]

P.D. Hoff, A.E. Raftery, and M.S. Handcock.
**Latent space approaches to social network analysis**.
*J. Amer. Statist. Assoc.*, 97(460):1090–1098, 2002.
[ bib |
pdf |
code ]

P.D. Hoff, R.B. Halberg, A. Shedlovsky, W.F. Dove, and M.A. Newton.
**Identifying carriers of a genetic modifier using nonparametric
Bayesian methods**.
In *Case studies in Bayesian statistics, Vol. V
(Pittsburgh, PA, 1999)*, volume 162 of *Lecture Notes in Statist.*,
pages 329–330. Springer, New York, 2002.
[ bib ]

R.B. Halberg, D.S. Katzung, P.D. Hoff, A.R. Moser, C.E. Cole, R.A. Lubet, L.A.
Donehower, R.F. Jacoby, and W.F. Dove.
**Tumorigenesis in the multiple intestinal neoplasia mouse:
redundancy of negative regulators and specificity of modifiers**.
*Proceedings of the National Academy of Sciences of the United
States of America*, 97(7):3461, 2000.
[ bib ]

P.D. Hoff.
**Constrained nonparametric maximum likelihood via mixtures**.
*J. Comput. Graph. Statist.*, 9(4):633–641, 2000.
[ bib |
pdf ]

P.D. Hoff.
*Constrained Nonparametric Estimation via Mixtures*.
PhD thesis, University of Wisconsin-Madison, Madison, Wisconsin,
2000.
[ bib |
pdf ]

L.A. Shepel, H. Lan, J.D. Haag, G.M. Brasic, M.E. Gheen, J.S. Simon, P. Hoff,
M.A. Newton, and M.N. Gould.
**Genetic identification of multiple loci that control breast
cancer susceptibility in the rat**.
*Genetics*, 149(1):289, 1998.
[ bib ]